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snp genotyping by sequenom massarray maldi-tof mass spectrometry  (Sequenom)

 
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    Sequenom snp genotyping by sequenom massarray maldi-tof mass spectrometry
    Snp Genotyping By Sequenom Massarray Maldi Tof Mass Spectrometry, supplied by Sequenom, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/massarray+maldi-tof+snp+genotyping/mass+spectrometry+snp+genotyping+system/bio_rxiv__2025__04__27__649857-385-4-7
    Average 90 stars, based on 1 article reviews
    snp genotyping by sequenom massarray maldi-tof mass spectrometry - by Bioz Stars, 2026-11
    90/100 stars

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    other:

    Article Title: ISL1 is a major susceptibility gene for classic bladder exstrophy and a regulator of urinary tract development
    Article Snippet: For SNP-marker genotyping, we used the Sequenom MALDI-TOF mass-spectrometer (MassArray system), TaqMan ® SNP genotyping assays (Life Technologies Europe BV, Netherlands) and conventional Sanger sequencing.

    Article Title: Altered GC- and AT-biased genotypes of Ophiocordyceps sinensis in the stromal fertile portions and ascospores of natural Cordyceps sinensis
    Article Snippet: Reagents and biochips required for MassARRAY SNP MALDI-TOF MS genotyping were from Sequenom, USA (acquired by Agena Bioscience Company).

    Article Title: Association of IL-33, IL1RL1 gene polymorphisms with serum IL-33 levels and risk of asthma in adults and asthmatic bronchitis in children (Chinese)
    Article Snippet: The genotyping of all 556 participants was performed using the MassARRAY® MALDI-TOF SNP genotyping system (Sequenom Inc., San Diego, Calif., USA).

    Genotyping:

    Article Title: Positive metacognitions about alcohol mediate the relationship between FKBP5 variability and problematic drinking in a sample of young women
    Article Snippet: .. A MALDI-TOF mass spectrometry-based SNP genotyping technique was used (Sequenom MassARRAY iPLEX platform, Sequenom, San Diego, CA, USA). ..



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    GT refers to genotype. Genotypes #1‒2 and #13‒14 are GC-biased O . sinensis genotypes, and Genotypes #4‒6 and #15‒17 are AT-biased O . sinensis genotypes. The GC and AT contents of the 17 O . sinensis genotypes are shown in . The underlined sequences in black represent primers for the first-step PCR. Extension primers 067721–477, 067721–531, 067740–324, 067744–324 (RC, reverse complement) and 067740–328 (RC) in brown were used for <t>SNP</t> mass spectrometry <t>genotyping</t> to distinguish between genotypes of O . sinensis . Arrows indicate the directions of the primer extension reactions toward the SNP alleles in brown. “-” refers to an identical base, and spaces refer to unmatched sequence gaps.
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    GT refers to genotype. Genotypes #1‒2 and #13‒14 are GC-biased O . sinensis genotypes, and Genotypes #4‒6 and #15‒17 are AT-biased O . sinensis genotypes. The GC and AT contents of the 17 O . sinensis genotypes are shown in . The underlined sequences in black represent primers for the first-step PCR. Extension primers 067721–477, 067721–531, 067740–324, 067744–324 (RC, reverse complement) and 067740–328 (RC) in brown were used for <t>SNP</t> mass spectrometry <t>genotyping</t> to distinguish between genotypes of O . sinensis . Arrows indicate the directions of the primer extension reactions toward the SNP alleles in brown. “-” refers to an identical base, and spaces refer to unmatched sequence gaps.
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    GT refers to genotype. Genotypes #1‒2 and #13‒14 are GC-biased O . sinensis genotypes, and Genotypes #4‒6 and #15‒17 are AT-biased O . sinensis genotypes. The GC and AT contents of the 17 O . sinensis genotypes are shown in . The underlined sequences in black represent primers for the first-step PCR. Extension primers 067721–477, 067721–531, 067740–324, 067744–324 (RC, reverse complement) and 067740–328 (RC) in brown were used for <t>SNP</t> mass spectrometry <t>genotyping</t> to distinguish between genotypes of O . sinensis . Arrows indicate the directions of the primer extension reactions toward the SNP alleles in brown. “-” refers to an identical base, and spaces refer to unmatched sequence gaps.
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    GT refers to genotype. Genotypes #1‒2 and #13‒14 are GC-biased O . sinensis genotypes, and Genotypes #4‒6 and #15‒17 are AT-biased O . sinensis genotypes. The GC and AT contents of the 17 O . sinensis genotypes are shown in . The underlined sequences in black represent primers for the first-step PCR. Extension primers 067721–477, 067721–531, 067740–324, 067744–324 (RC, reverse complement) and 067740–328 (RC) in brown were used for SNP mass spectrometry genotyping to distinguish between genotypes of O . sinensis . Arrows indicate the directions of the primer extension reactions toward the SNP alleles in brown. “-” refers to an identical base, and spaces refer to unmatched sequence gaps.

    Journal: PLOS ONE

    Article Title: Altered GC- and AT-biased genotypes of Ophiocordyceps sinensis in the stromal fertile portions and ascospores of natural Cordyceps sinensis

    doi: 10.1371/journal.pone.0286865

    Figure Lengend Snippet: GT refers to genotype. Genotypes #1‒2 and #13‒14 are GC-biased O . sinensis genotypes, and Genotypes #4‒6 and #15‒17 are AT-biased O . sinensis genotypes. The GC and AT contents of the 17 O . sinensis genotypes are shown in . The underlined sequences in black represent primers for the first-step PCR. Extension primers 067721–477, 067721–531, 067740–324, 067744–324 (RC, reverse complement) and 067740–328 (RC) in brown were used for SNP mass spectrometry genotyping to distinguish between genotypes of O . sinensis . Arrows indicate the directions of the primer extension reactions toward the SNP alleles in brown. “-” refers to an identical base, and spaces refer to unmatched sequence gaps.

    Article Snippet: Reagents and biochips required for MassARRAY SNP MALDI-TOF MS genotyping were from Sequenom, USA (acquired by Agena Bioscience Company).

    Techniques: Mass Spectrometry, Sequencing

     SNP  extension primers for  MassARRAY MALDI-TOF MS genotyping.

    Journal: PLOS ONE

    Article Title: Altered GC- and AT-biased genotypes of Ophiocordyceps sinensis in the stromal fertile portions and ascospores of natural Cordyceps sinensis

    doi: 10.1371/journal.pone.0286865

    Figure Lengend Snippet: SNP extension primers for MassARRAY MALDI-TOF MS genotyping.

    Article Snippet: Reagents and biochips required for MassARRAY SNP MALDI-TOF MS genotyping were from Sequenom, USA (acquired by Agena Bioscience Company).

    Techniques: Sequencing

    GT refers to genotype. Genotypes #1‒2 and #13‒14 are GC-biased O . sinensis genotypes, and Genotypes #4‒6 and #15‒17 are AT-biased O . sinensis genotypes. The GC and AT contents of the 17 O . sinensis genotypes are shown in . The underlined sequences in black represent primers for the first-step PCR. Extension primers 067721–477, 067721–531, 067740–324, 067744–324 (RC, reverse complement) and 067740–328 (RC) in brown were used for SNP mass spectrometry genotyping to distinguish between genotypes of O . sinensis . Arrows indicate the directions of the primer extension reactions toward the SNP alleles in brown. “-” refers to an identical base, and spaces refer to unmatched sequence gaps.

    Journal: PLOS ONE

    Article Title: Altered GC- and AT-biased genotypes of Ophiocordyceps sinensis in the stromal fertile portions and ascospores of natural Cordyceps sinensis

    doi: 10.1371/journal.pone.0286865

    Figure Lengend Snippet: GT refers to genotype. Genotypes #1‒2 and #13‒14 are GC-biased O . sinensis genotypes, and Genotypes #4‒6 and #15‒17 are AT-biased O . sinensis genotypes. The GC and AT contents of the 17 O . sinensis genotypes are shown in . The underlined sequences in black represent primers for the first-step PCR. Extension primers 067721–477, 067721–531, 067740–324, 067744–324 (RC, reverse complement) and 067740–328 (RC) in brown were used for SNP mass spectrometry genotyping to distinguish between genotypes of O . sinensis . Arrows indicate the directions of the primer extension reactions toward the SNP alleles in brown. “-” refers to an identical base, and spaces refer to unmatched sequence gaps.

    Article Snippet: The MassARRAY SNP MALDI-TOF MS genotyping experiments were performed by a service company, CapitalBio Co., in Beijing, China.

    Techniques: Mass Spectrometry, Sequencing

     SNP  extension primers for  MassARRAY MALDI-TOF MS genotyping.

    Journal: PLOS ONE

    Article Title: Altered GC- and AT-biased genotypes of Ophiocordyceps sinensis in the stromal fertile portions and ascospores of natural Cordyceps sinensis

    doi: 10.1371/journal.pone.0286865

    Figure Lengend Snippet: SNP extension primers for MassARRAY MALDI-TOF MS genotyping.

    Article Snippet: The MassARRAY SNP MALDI-TOF MS genotyping experiments were performed by a service company, CapitalBio Co., in Beijing, China.

    Techniques: Sequencing